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GHSA-8j3x-m868-cpw8

Open Babel has out-of-bounds write (overlapping memcpy) in zipstream basic_unzip_streambuf::underflow

Source: GitHub Advisory Database (reviewed) Low CVE-2025-10995

Packages

EcosystemPackageAffectedFixed in
PyPI openbabel < 3.2.0 3.2.0

Details

As written in the advisory (Markdown source, shown as plain text).

### Summary A memory-safety vulnerability in Open Babel's bundled zipstream decompression code caused an out-of-bounds write via overlapping `memcpy` when reading a crafted gzip-compressed chemistry file. ### Details The flaw was in `basic_unzip_streambuf::underflow`. The decompression buffer refill path invoked `memcpy` with overlapping source and destination regions, which is undefined behavior and produced out-of-bounds writes in practice. Any file format read through the gzip-wrapped reader was a potential trigger. ### Impact Open Babel is a C++ library and CLI used to read and write chemistry file formats; it is shipped by Linux distributions and embedded in services that may parse untrusted input. Triggering this vulnerability requires the victim to open a malicious gzip-compressed chemistry file with the `obabel` tool, the `OBConversion` API, or any of the language bindings (Python, Ruby, Java, R, Perl, C#, PHP). ### Affected versions All releases up to and including 3.1.1. ### Patched version 3.2.0 (released 2026-05-26). ### Patch Fix commit: https://github.com/openbabel/openbabel/commit/d4621d41 Originally reported as #2832; fixes consolidated in #2913. A minimized reproducer for this CVE is checked in under `test/files/fuzz_regress/` and is exercised on every CI build under ASAN+UBSAN by the `fuzzregresstest` harness. ### Credit Reported via OSS-Fuzz.

References

External links from the advisory. They lead to third-party sites.